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공공누리This item is licensed Korea Open Government License

Alternative Title
Comparative study of codon substitution patterns in foot-and-mouth disease virus (serotype O)
Author(s)
안인성
Publication Year
2011-10-31
Abstract
We compared genetic variations in the VP1 gene of foot-and-mouth disease viruses (FMDVs) isolated since 2000 according to the region of the world from. We analyzed relative synonymous codon usage (RSCU) and phylogenetic relationship between geographical regions, and calculated the genetic substitution patterns between Korean isolate and those from other countries. We calculated the ratios of synonymously substituted codons (SSC) to all observed substitutions and developed a new analytical parameter, EMC (the ratio of exact matching codons within each synonymous substitution group) to investigate more detailed substitution patterns within each synonymous codon group.
Keyword
amino acid substitution; codon; foot-and-mouth disease virus; genetic variation
Journal Title
Experimental & molecular medicine
Citation Volume
43
ISSN
1226-3613
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Appears in Collections:
7. KISTI 연구성과 > 학술지 발표논문
URI
https://repository.kisti.re.kr/handle/10580/13954
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